BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB025C08LP1|AL428356
(890 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1581 1748 0.0
3x_Contig1738 101 2e-21
>3x_Contig1581
Length = 11429
Score = 1748 bits (880), Expect = 0.0
Identities = 886/890 (99%)
Strand = Plus / Plus
Query: 1 aatctctttggccaagtctccagcttccaccatccaaatcttgggtgctgaaaaggctct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2277 aatctctttggccaagtctccagcttccaccatccaaatcttgggtgctgaaaaggctct 2336
Query: 61 tttcagagcattgaaaactaagcatgacactcctaaatatggtctattgtaccacgcttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2337 tttcagagcattgaaaactaagcatgacactcctaaatatggtctattgtaccacgcttc 2396
Query: 121 cttggttggccaagcatctggtaagaacaagggtaagattgccagagttttggctgctaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2397 cttggttggccaagcatctggtaagaacaagggtaagattgccagagttttggctgctaa 2456
Query: 181 ggctgccgtttctttgcgttacgatgctttggctgaagatagagacgattctggtgacat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2457 ggctgccgtttctttgcgttacgatgctttggctgaagatagagacgattctggtgacat 2516
Query: 241 cggtttggaatccagagctaaggtagaatcaagattgtccctwttwkaaggcagagactt 300
||||||||||||||||||||||||||||||||||||||||| || |||||||||||||
Sbjct: 2517 cggtttggaatccagagctaaggtagaatcaagattgtcccaattagaaggcagagactt 2576
Query: 301 gagaaccacaccaaaggtcgtccgtgagcacaagaagactgaaatcacagaggctagagc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2577 gagaaccacaccaaaggtcgtccgtgagcacaagaagactgaaatcacagaggctagagc 2636
Query: 361 atacaacgcagatgctgacaccgtgtcttcagctgctgctcctgctgactctgatgatga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2637 atacaacgcagatgctgacaccgtgtcttcagctgctgctcctgctgactctgatgatga 2696
Query: 421 atccgaggacgaggaagaaaccaaggaagaaaagaaatctaagaaggataagaaggataa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2697 atccgaggacgaggaagaaaccaaggaagaaaagaaatctaagaaggataagaaggataa 2756
Query: 481 gaagagaaagagagacgatgatgaagagtctaaggaatctaagaagtctaagaaggagaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2757 gaagagaaagagagacgatgatgaagagtctaaggaatctaagaagtctaagaaggagaa 2816
Query: 541 gaaagacaagaaggaaaagaaggaaaagaaggaaaagaaagaaaaaaaggataagaaatc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2817 gaaagacaagaaggaaaagaaggaaaagaaggaaaagaaagaaaaaaaggataagaaatc 2876
Query: 601 taagaaggaaaagaaatagatatagtattcacattaaaaccccactcttttgcattaaat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2877 taagaaggaaaagaaatagatatagtattcacattaaaaccccactcttttgcattaaat 2936
Query: 661 ctctaataacctcgtataaatctgttccattacatacgaacatactatgtgtgtacctct 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2937 ctctaataacctcgtataaatctgttccattacatacgaacatactatgtgtgtacctct 2996
Query: 721 gtaaattagtctgtatcaaattcaaacaaaatataataattgaattattgtcatacgctg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2997 gtaaattagtctgtatcaaattcaaacaaaatataataattgaattattgtcatacgctg 3056
Query: 781 tactcttcttctcattgtcatcgtcaatggctttgatagttacatcaaaatattcactga 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3057 tactcttcttctcattgtcatcgtcaatggctttgatagttacatcaaaatattcactga 3116
Query: 841 tgaaaatgttgaaatatacaattcttaaattcggacaagttggcgatgag 890
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3117 tgaaaatgttgaaatatacaattcttaaattcggacaagttggcgatgag 3166
>3x_Contig1738
Length = 21411
Score = 101 bits (51), Expect = 2e-21
Identities = 84/95 (88%)
Strand = Plus / Minus
Query: 521 aagaagtctaagaaggagaagaaagacaagaaggaaaagaaggaaaagaaggaaaagaaa 580
||||||||||||||||| ||||| ||||||||||| |||||||||||||||||||||||
Sbjct: 6204 aagaagtctaagaaggacaagaaggacaagaaggacaagaaggaaaagaaggaaaagaag 6145
Query: 581 gaaaaaaaggataagaaatctaagaaggaaaagaa 615
||||| || || |||||| |||||||| |||||
Sbjct: 6144 gaaaagaaagagaagaaagagaagaaggataagaa 6110
Score = 99.8 bits (50), Expect = 8e-21
Identities = 77/86 (89%)
Strand = Plus / Minus
Query: 530 aagaaggagaagaaagacaagaaggaaaagaaggaaaagaaggaaaagaaagaaaaaaag 589
|||||||| ||||| |||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 6186 aagaaggacaagaaggacaagaaggaaaagaaggaaaagaaggaaaagaaagagaagaaa 6127
Query: 590 gataagaaatctaagaaggaaaagaa 615
|| ||||| |||||||||||||||
Sbjct: 6126 gagaagaaggataagaaggaaaagaa 6101
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 10,270
Number of Sequences: 1807
Number of extensions: 10270
Number of successful extensions: 223
Number of sequences better than 1.0e-20: 2
length of query: 890
length of database: 10,358,551
effective HSP length: 16
effective length of query: 874
effective length of database: 10,329,639
effective search space: 9028104486
effective search space used: 9028104486
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)